Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 MKRN4P-201ENST00000444706 1521 ntBASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 AC026471.1-201ENST00000564629 3026 ntBASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF11Q9Y3C5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF11Q9Y3C5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 HLA-G-202ENST00000376815 851 ntBASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 HLA-G-203ENST00000376818 1127 ntBASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 BX276092.2-201ENST00000417668 665 ntBASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF11Q9Y3C5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 AC023632.3-201ENST00000521633 145 ntBASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 AC009237.14-201ENST00000609975 1594 ntBASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF11Q9Y3C5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 TREX1-205ENST00000625293 1783 ntBASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms