Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.08■□□□□ 0.8
CHMP2BQ9UQN3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
CHMP2BQ9UQN3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CHMP2BQ9UQN3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.08■□□□□ 0.8
CHMP2BQ9UQN3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP2BQ9UQN3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.08■□□□□ 0.8
CHMP2BQ9UQN3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CHMP2BQ9UQN3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 AC120498.9-201ENST00000339021 3867 ntBASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 TNXA-203ENST00000507684 2038 ntBASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 AP001271.2-201ENST00000624018 1556 ntBASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 Z82202.1-201ENST00000623446 1880 ntBASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2BQ9UQN3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2BQ9UQN3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 AC004408.2-201ENST00000623613 2777 ntBASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 AC069236.1-201ENST00000604339 616 ntBASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2BQ9UQN3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 AC006015.1-201ENST00000429970 570 ntBASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms