Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC25.89■■□□□ 1.73
SPG7Q9UQ90 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.89■■□□□ 1.73
SPG7Q9UQ90 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SPG7Q9UQ90 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.89■■□□□ 1.73
SPG7Q9UQ90 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SPG7Q9UQ90 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 CRYGFP-201ENST00000418459 633 ntBASIC25.88■■□□□ 1.73
SPG7Q9UQ90 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 AC104076.2-201ENST00000448912 469 ntBASIC25.88■■□□□ 1.73
SPG7Q9UQ90 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 AC010203.1-204ENST00000548782 407 ntBASIC25.88■■□□□ 1.73
SPG7Q9UQ90 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.88■■□□□ 1.73
SPG7Q9UQ90 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPG7Q9UQ90 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 DUX4L26-201ENST00000489078 1255 ntBASIC25.86■■□□□ 1.73
SPG7Q9UQ90 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 AC130371.2-201ENST00000619443 611 ntBASIC25.86■■□□□ 1.73
SPG7Q9UQ90 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.86■■□□□ 1.73
SPG7Q9UQ90 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 LIN28AP1-201ENST00000429574 405 ntBASIC25.85■■□□□ 1.73
SPG7Q9UQ90 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 ECEL1P2-202ENST00000465689 757 ntBASIC25.85■■□□□ 1.73
SPG7Q9UQ90 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SPG7Q9UQ90 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
SPG7Q9UQ90 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.83■■□□□ 1.73
SPG7Q9UQ90 AC026310.3-201ENST00000625186 2373 ntBASIC25.83■■□□□ 1.73
SPG7Q9UQ90 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SPG7Q9UQ90 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SPG7Q9UQ90 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SPG7Q9UQ90 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SPG7Q9UQ90 AC128688.1-201ENST00000487626 519 ntBASIC25.83■■□□□ 1.73
SPG7Q9UQ90 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SPG7Q9UQ90 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.83■■□□□ 1.73
SPG7Q9UQ90 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SPG7Q9UQ90 AP000692.2-201ENST00000608391 879 ntBASIC25.83■■□□□ 1.73
SPG7Q9UQ90 AC007375.3-201ENST00000600936 2314 ntBASIC25.83■■□□□ 1.73
SPG7Q9UQ90 CLDN5-201ENST00000403084 2357 ntBASIC25.83■■□□□ 1.73
SPG7Q9UQ90 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SPG7Q9UQ90 RCC2P6-201ENST00000526625 1557 ntBASIC25.82■■□□□ 1.72
SPG7Q9UQ90 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 ATP5G1P1-201ENST00000448724 379 ntBASIC25.82■■□□□ 1.72
SPG7Q9UQ90 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 SLC25A1P4-201ENST00000567977 778 ntBASIC25.82■■□□□ 1.72
SPG7Q9UQ90 HLA-A-209ENST00000638375 975 ntBASIC25.82■■□□□ 1.72
SPG7Q9UQ90 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms