Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 AF186192.3-201ENST00000583427 947 ntBASIC18.61■□□□□ 0.57
CTSFQ9UBX1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 FEM1AP1-201ENST00000431297 1995 ntBASIC18.61■□□□□ 0.57
CTSFQ9UBX1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 TFP1-202ENST00000475455 1573 ntBASIC18.6■□□□□ 0.57
CTSFQ9UBX1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 AP006587.1-201ENST00000534129 1502 ntBASIC18.6■□□□□ 0.57
CTSFQ9UBX1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CTSFQ9UBX1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSFQ9UBX1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.58■□□□□ 0.57
CTSFQ9UBX1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSFQ9UBX1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSFQ9UBX1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSFQ9UBX1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CTSFQ9UBX1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CTSFQ9UBX1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.58■□□□□ 0.57
CTSFQ9UBX1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CTSFQ9UBX1 AL391422.3-201ENST00000603791 2761 ntBASIC18.58■□□□□ 0.56
CTSFQ9UBX1 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.58■□□□□ 0.56
CTSFQ9UBX1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSFQ9UBX1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 AL353807.1-201ENST00000427475 662 ntBASIC18.57■□□□□ 0.56
CTSFQ9UBX1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms