Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 KRT87P-202ENST00000534226 1464 ntBASIC19.09■□□□□ 0.65
NDE1Q9NXR1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NDE1Q9NXR1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NDE1Q9NXR1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NDE1Q9NXR1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.08■□□□□ 0.65
NDE1Q9NXR1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NDE1Q9NXR1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 MIR572-201ENST00000384983 95 ntBASIC19.08■□□□□ 0.64
NDE1Q9NXR1 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.08■□□□□ 0.64
NDE1Q9NXR1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 AL358852.1-201ENST00000623174 1268 ntBASIC19.08■□□□□ 0.64
NDE1Q9NXR1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.08■□□□□ 0.64
NDE1Q9NXR1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NDE1Q9NXR1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 AL035685.1-201ENST00000636663 812 ntBASIC19.07■□□□□ 0.64
NDE1Q9NXR1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.07■□□□□ 0.64
NDE1Q9NXR1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDE1Q9NXR1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms