Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 AC069152.1-201ENST00000438030 544 ntBASIC19.73■□□□□ 0.75
TREX1Q9NSU2 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.73■□□□□ 0.75
TREX1Q9NSU2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 AC092368.3-202ENST00000574180 1591 ntBASIC19.73■□□□□ 0.75
TREX1Q9NSU2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TREX1Q9NSU2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 AC060766.5-201ENST00000590539 871 ntBASIC19.72■□□□□ 0.75
TREX1Q9NSU2 AC005332.7-201ENST00000614046 2005 ntBASIC19.72■□□□□ 0.75
TREX1Q9NSU2 AC133041.1-202ENST00000642053 222 ntBASIC19.72■□□□□ 0.75
TREX1Q9NSU2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TREX1Q9NSU2 AC124283.5-201ENST00000624661 1809 ntBASIC19.72■□□□□ 0.75
TREX1Q9NSU2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 PNMA6B-201ENST00000538162 1200 ntBASIC19.71■□□□□ 0.75
TREX1Q9NSU2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TREX1Q9NSU2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TREX1Q9NSU2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 RPS2P52-201ENST00000469610 820 ntBASIC19.69■□□□□ 0.74
TREX1Q9NSU2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms