Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 PCDHAC2-203ENST00000615316 3011 ntBASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A20Q9NP91 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 AP001271.2-201ENST00000624018 1556 ntBASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 C1QBPP2-201ENST00000528754 825 ntBASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A20Q9NP91 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 AC239809.2-201ENST00000415381 517 ntBASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 PRKY-204ENST00000533551 1019 ntBASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 AL359736.2-201ENST00000621992 437 ntBASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 AC009237.14-201ENST00000609975 1594 ntBASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A20Q9NP91 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 KRASP1-201ENST00000407852 552 ntBASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 RPPH1-201ENST00000516869 333 ntBASIC18.96■□□□□ 0.63
SLC6A20Q9NP91 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms