Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 KRT16P2-201ENST00000414673 1423 ntBASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 AC116050.2-201ENST00000612102 1779 ntBASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 AC120498.10-201ENST00000621827 505 ntBASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 TREX1-205ENST00000625293 1783 ntBASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.22□□□□□ -0.29
SND1-IT1Q9HBX3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.21□□□□□ -0.29
SND1-IT1Q9HBX3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
SND1-IT1Q9HBX3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 AC012414.1-201ENST00000556676 535 ntBASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 KRT87P-202ENST00000534226 1464 ntBASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SND1-IT1Q9HBX3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SND1-IT1Q9HBX3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms