Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.69■■□□□ 1.06
VPS16Q9H269 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 Z82202.1-201ENST00000623446 1880 ntBASIC21.69■■□□□ 1.06
VPS16Q9H269 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS16Q9H269 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
VPS16Q9H269 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
VPS16Q9H269 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 AC007322.1-201ENST00000426983 750 ntBASIC21.68■■□□□ 1.06
VPS16Q9H269 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.68■■□□□ 1.06
VPS16Q9H269 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.68■■□□□ 1.06
VPS16Q9H269 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 AC010980.2-201ENST00000587099 1412 ntBASIC21.68■■□□□ 1.06
VPS16Q9H269 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.68■■□□□ 1.06
VPS16Q9H269 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS16Q9H269 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS16Q9H269 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS16Q9H269 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.67■■□□□ 1.06
VPS16Q9H269 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
VPS16Q9H269 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
VPS16Q9H269 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
VPS16Q9H269 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 AC120498.9-201ENST00000339021 3867 ntBASIC21.67■■□□□ 1.06
VPS16Q9H269 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 HLA-G-202ENST00000376815 851 ntBASIC21.67■■□□□ 1.06
VPS16Q9H269 HLA-G-203ENST00000376818 1127 ntBASIC21.67■■□□□ 1.06
VPS16Q9H269 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VPS16Q9H269 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.67■■□□□ 1.06
VPS16Q9H269 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.67■■□□□ 1.06
VPS16Q9H269 AC231657.2-201ENST00000624556 255 ntBASIC21.67■■□□□ 1.06
VPS16Q9H269 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.67■■□□□ 1.06
VPS16Q9H269 AC004408.2-201ENST00000623613 2777 ntBASIC21.67■■□□□ 1.06
VPS16Q9H269 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
VPS16Q9H269 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
VPS16Q9H269 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.66■■□□□ 1.06
VPS16Q9H269 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.66■■□□□ 1.06
VPS16Q9H269 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 TNXA-203ENST00000507684 2038 ntBASIC21.66■■□□□ 1.06
VPS16Q9H269 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.66■■□□□ 1.06
VPS16Q9H269 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS16Q9H269 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.66■■□□□ 1.06
VPS16Q9H269 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
VPS16Q9H269 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 KRT17P1-201ENST00000399211 1546 ntBASIC21.65■■□□□ 1.06
VPS16Q9H269 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS16Q9H269 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
VPS16Q9H269 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS16Q9H269 AC093787.1-201ENST00000450396 207 ntBASIC21.65■■□□□ 1.06
VPS16Q9H269 C2orf69P4-201ENST00000565394 541 ntBASIC21.65■■□□□ 1.06
VPS16Q9H269 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.65■■□□□ 1.06
VPS16Q9H269 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.65■■□□□ 1.06
VPS16Q9H269 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VPS16Q9H269 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS16Q9H269 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS16Q9H269 PHGDH-210ENST00000641115 1638 ntBASIC21.65■■□□□ 1.06
VPS16Q9H269 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
VPS16Q9H269 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms