Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.45■■□□□ 1.03
CDT1Q9H211 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CDT1Q9H211 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CDT1Q9H211 AP001271.2-201ENST00000624018 1556 ntBASIC21.45■■□□□ 1.02
CDT1Q9H211 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 AL049637.2-201ENST00000641778 930 ntBASIC21.45■■□□□ 1.02
CDT1Q9H211 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.45■■□□□ 1.02
CDT1Q9H211 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.45■■□□□ 1.02
CDT1Q9H211 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 LINC01521-201ENST00000504184 1943 ntBASIC21.45■■□□□ 1.02
CDT1Q9H211 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDT1Q9H211 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CDT1Q9H211 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.44■■□□□ 1.02
CDT1Q9H211 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.44■■□□□ 1.02
CDT1Q9H211 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.44■■□□□ 1.02
CDT1Q9H211 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDT1Q9H211 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CDT1Q9H211 SNORA78-201ENST00000459373 127 ntBASIC21.44■■□□□ 1.02
CDT1Q9H211 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.44■■□□□ 1.02
CDT1Q9H211 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.44■■□□□ 1.02
CDT1Q9H211 AC113410.3-201ENST00000623366 203 ntBASIC21.44■■□□□ 1.02
CDT1Q9H211 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.44■■□□□ 1.02
CDT1Q9H211 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDT1Q9H211 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CDT1Q9H211 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDT1Q9H211 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDT1Q9H211 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.44■■□□□ 1.02
CDT1Q9H211 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.43■■□□□ 1.02
CDT1Q9H211 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.43■■□□□ 1.02
CDT1Q9H211 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CDT1Q9H211 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDT1Q9H211 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.43■■□□□ 1.02
CDT1Q9H211 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDT1Q9H211 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 KRT18P16-201ENST00000510337 1294 ntBASIC21.43■■□□□ 1.02
CDT1Q9H211 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.43■■□□□ 1.02
CDT1Q9H211 AF186192.3-201ENST00000583427 947 ntBASIC21.43■■□□□ 1.02
CDT1Q9H211 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.43■■□□□ 1.02
CDT1Q9H211 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.43■■□□□ 1.02
CDT1Q9H211 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
CDT1Q9H211 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDT1Q9H211 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
CDT1Q9H211 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDT1Q9H211 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDT1Q9H211 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDT1Q9H211 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDT1Q9H211 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.42■■□□□ 1.02
CDT1Q9H211 TCF3P1-201ENST00000423021 1937 ntBASIC21.42■■□□□ 1.02
CDT1Q9H211 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.42■■□□□ 1.02
CDT1Q9H211 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDT1Q9H211 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDT1Q9H211 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.42■■□□□ 1.02
CDT1Q9H211 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDT1Q9H211 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.42■■□□□ 1.02
CDT1Q9H211 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.42■■□□□ 1.02
CDT1Q9H211 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.42■■□□□ 1.02
CDT1Q9H211 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CDT1Q9H211 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDT1Q9H211 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDT1Q9H211 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDT1Q9H211 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDT1Q9H211 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDT1Q9H211 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDT1Q9H211 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CDT1Q9H211 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDT1Q9H211 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms