Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 SMG8-203ENST00000578922 2178 ntBASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SSBP3Q9BWW4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 NBPF21P-201ENST00000425093 1451 ntBASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.46■□□□□ 0.23
SSBP3Q9BWW4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 AC020907.5-201ENST00000624372 1936 ntBASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSBP3Q9BWW4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 AC004264.1-201ENST00000608354 794 ntBASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms