Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 HSCB-202ENST00000398941 955 ntTSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 STX7-201ENST00000367937 1090 ntTSL 5 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 GAS2L1P2-201ENST00000436355 1356 ntBASIC11.73□□□□□ -0.53
LIMD2Q9BT23 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 AC069236.1-201ENST00000604339 616 ntBASIC11.73□□□□□ -0.53
LIMD2Q9BT23 AC087623.3-201ENST00000607047 1098 ntBASIC11.73□□□□□ -0.53
LIMD2Q9BT23 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 MDK-213ENST00000617138 635 ntTSL 2 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
LIMD2Q9BT23 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 HACD1-201ENST00000326961 773 ntTSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 METTL26-203ENST00000397664 604 ntTSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 BID-214ENST00000617586 542 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms