Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 RPS2P4-201ENST00000476944 856 ntBASIC20.78■□□□□ 0.92
SMOQ99835 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.78■□□□□ 0.92
SMOQ99835 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.78■□□□□ 0.92
SMOQ99835 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.78■□□□□ 0.92
SMOQ99835 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SMOQ99835 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.78■□□□□ 0.92
SMOQ99835 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SMOQ99835 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SMOQ99835 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SMOQ99835 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.77■□□□□ 0.92
SMOQ99835 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.77■□□□□ 0.92
SMOQ99835 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SMOQ99835 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.77■□□□□ 0.92
SMOQ99835 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SMOQ99835 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SMOQ99835 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMOQ99835 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SMOQ99835 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SMOQ99835 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SMOQ99835 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMOQ99835 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMOQ99835 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SMOQ99835 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.76■□□□□ 0.91
SMOQ99835 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMOQ99835 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMOQ99835 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMOQ99835 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.76■□□□□ 0.91
SMOQ99835 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SMOQ99835 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMOQ99835 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.76■□□□□ 0.91
SMOQ99835 RARRES2P10-201ENST00000564312 460 ntBASIC20.76■□□□□ 0.91
SMOQ99835 AC004264.1-201ENST00000608354 794 ntBASIC20.76■□□□□ 0.91
SMOQ99835 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMOQ99835 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SMOQ99835 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMOQ99835 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.76■□□□□ 0.91
SMOQ99835 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMOQ99835 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.75■□□□□ 0.91
SMOQ99835 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 RPS2P55-201ENST00000397318 883 ntBASIC20.75■□□□□ 0.91
SMOQ99835 YBX1P10-201ENST00000444752 975 ntBASIC20.75■□□□□ 0.91
SMOQ99835 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.75■□□□□ 0.91
SMOQ99835 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SMOQ99835 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 AC107956.1-201ENST00000494359 873 ntBASIC20.75■□□□□ 0.91
SMOQ99835 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.75■□□□□ 0.91
SMOQ99835 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.75■□□□□ 0.91
SMOQ99835 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.75■□□□□ 0.91
SMOQ99835 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.75■□□□□ 0.91
SMOQ99835 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.75■□□□□ 0.91
SMOQ99835 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 AC009237.14-201ENST00000609975 1594 ntBASIC20.75■□□□□ 0.91
SMOQ99835 HTR7P1-201ENST00000538670 1336 ntBASIC20.75■□□□□ 0.91
SMOQ99835 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMOQ99835 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMOQ99835 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.74■□□□□ 0.91
SMOQ99835 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMOQ99835 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SMOQ99835 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.74■□□□□ 0.91
SMOQ99835 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.74■□□□□ 0.91
SMOQ99835 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMOQ99835 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMOQ99835 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMOQ99835 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SMOQ99835 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMOQ99835 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SMOQ99835 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.74■□□□□ 0.91
SMOQ99835 KRT18P16-201ENST00000510337 1294 ntBASIC20.74■□□□□ 0.91
SMOQ99835 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SMOQ99835 AC233702.5-201ENST00000584107 538 ntBASIC20.74■□□□□ 0.91
SMOQ99835 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.74■□□□□ 0.91
SMOQ99835 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMOQ99835 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMOQ99835 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMOQ99835 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms