Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
TM9SF2Q99805 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF2Q99805 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF2Q99805 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF2Q99805 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF2Q99805 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF2Q99805 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.27■□□□□ 0.52
TM9SF2Q99805 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.27■□□□□ 0.52
TM9SF2Q99805 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF2Q99805 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF2Q99805 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TM9SF2Q99805 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF2Q99805 AC105020.6-201ENST00000621523 1217 ntBASIC18.27■□□□□ 0.52
TM9SF2Q99805 HLA-B-256ENST00000639848 1089 ntBASIC18.27■□□□□ 0.52
TM9SF2Q99805 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF2Q99805 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TM9SF2Q99805 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF2Q99805 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.26■□□□□ 0.51
TM9SF2Q99805 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 ESRRAP1-201ENST00000400596 1257 ntBASIC18.26■□□□□ 0.51
TM9SF2Q99805 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 AC060766.5-201ENST00000590539 871 ntBASIC18.26■□□□□ 0.51
TM9SF2Q99805 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.26■□□□□ 0.51
TM9SF2Q99805 AC098818.2-201ENST00000564925 2320 ntBASIC18.26■□□□□ 0.51
TM9SF2Q99805 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF2Q99805 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 AC018445.3-201ENST00000624177 1945 ntBASIC18.25■□□□□ 0.51
TM9SF2Q99805 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 AC087633.2-202ENST00000565166 1439 ntBASIC18.25■□□□□ 0.51
TM9SF2Q99805 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 UNC93B5-201ENST00000530315 699 ntBASIC18.25■□□□□ 0.51
TM9SF2Q99805 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF2Q99805 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TM9SF2Q99805 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 TCF3P1-201ENST00000423021 1937 ntBASIC18.24■□□□□ 0.51
TM9SF2Q99805 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF2Q99805 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
TM9SF2Q99805 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms