Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18■□□□□ 0.47
NPAS1Q99742 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NPAS1Q99742 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18■□□□□ 0.47
NPAS1Q99742 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS1Q99742 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18■□□□□ 0.47
NPAS1Q99742 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18■□□□□ 0.47
NPAS1Q99742 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS1Q99742 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS1Q99742 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18■□□□□ 0.47
NPAS1Q99742 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18■□□□□ 0.47
NPAS1Q99742 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18■□□□□ 0.47
NPAS1Q99742 LBX2-AS1-202ENST00000603175 2083 ntBASIC18■□□□□ 0.47
NPAS1Q99742 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS1Q99742 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18■□□□□ 0.47
NPAS1Q99742 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS1Q99742 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS1Q99742 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS1Q99742 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.99■□□□□ 0.47
NPAS1Q99742 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 KRT16P6-202ENST00000425692 1426 ntBASIC17.99■□□□□ 0.47
NPAS1Q99742 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.99■□□□□ 0.47
NPAS1Q99742 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NPAS1Q99742 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NPAS1Q99742 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.99■□□□□ 0.47
NPAS1Q99742 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.99■□□□□ 0.47
NPAS1Q99742 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.99■□□□□ 0.47
NPAS1Q99742 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.99■□□□□ 0.47
NPAS1Q99742 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.99■□□□□ 0.47
NPAS1Q99742 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.99■□□□□ 0.47
NPAS1Q99742 AC006058.3-201ENST00000606217 1069 ntBASIC17.99■□□□□ 0.47
NPAS1Q99742 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.99■□□□□ 0.47
NPAS1Q99742 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS1Q99742 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.99■□□□□ 0.47
NPAS1Q99742 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NPAS1Q99742 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
NPAS1Q99742 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.98■□□□□ 0.47
NPAS1Q99742 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NPAS1Q99742 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS1Q99742 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NPAS1Q99742 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS1Q99742 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS1Q99742 POM121L13P-201ENST00000422362 380 ntBASIC17.98■□□□□ 0.47
NPAS1Q99742 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.98■□□□□ 0.47
NPAS1Q99742 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS1Q99742 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.98■□□□□ 0.47
NPAS1Q99742 AC073648.6-201ENST00000641589 218 ntBASIC17.98■□□□□ 0.47
NPAS1Q99742 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS1Q99742 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NPAS1Q99742 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NPAS1Q99742 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS1Q99742 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS1Q99742 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS1Q99742 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS1Q99742 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NPAS1Q99742 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS1Q99742 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS1Q99742 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS1Q99742 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS1Q99742 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.97■□□□□ 0.47
NPAS1Q99742 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.97■□□□□ 0.47
NPAS1Q99742 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.97■□□□□ 0.47
NPAS1Q99742 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS1Q99742 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NPAS1Q99742 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS1Q99742 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS1Q99742 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS1Q99742 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS1Q99742 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS1Q99742 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms