Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC38A3Q99624 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC38A3Q99624 AC018553.1-201ENST00000616682 1458 ntBASIC19.16■□□□□ 0.66
SLC38A3Q99624 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A3Q99624 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A3Q99624 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A3Q99624 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A3Q99624 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A3Q99624 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A3Q99624 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A3Q99624 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A3Q99624 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SLC38A3Q99624 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.14■□□□□ 0.66
SLC38A3Q99624 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.14■□□□□ 0.66
SLC38A3Q99624 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC38A3Q99624 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC38A3Q99624 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A3Q99624 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A3Q99624 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A3Q99624 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 AP003071.4-201ENST00000562276 1284 ntBASIC19.14■□□□□ 0.65
SLC38A3Q99624 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A3Q99624 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC38A3Q99624 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A3Q99624 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A3Q99624 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A3Q99624 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A3Q99624 PHGDH-210ENST00000641115 1638 ntBASIC19.14■□□□□ 0.65
SLC38A3Q99624 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 AL355075.4-201ENST00000554988 638 ntBASIC19.13■□□□□ 0.65
SLC38A3Q99624 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 AL353708.3-201ENST00000610272 989 ntBASIC19.13■□□□□ 0.65
SLC38A3Q99624 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC38A3Q99624 TFP1-202ENST00000475455 1573 ntBASIC19.13■□□□□ 0.65
SLC38A3Q99624 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A3Q99624 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC38A3Q99624 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC38A3Q99624 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC38A3Q99624 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC38A3Q99624 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC38A3Q99624 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 AC211429.1-201ENST00000415277 523 ntBASIC19.12■□□□□ 0.65
SLC38A3Q99624 ECEL1P3-201ENST00000427961 737 ntBASIC19.12■□□□□ 0.65
SLC38A3Q99624 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC38A3Q99624 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SLC38A3Q99624 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC38A3Q99624 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC38A3Q99624 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC38A3Q99624 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms