Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 MFSD11-216ENST00000590393 1141 ntBASIC17.94■□□□□ 0.46
SNX18Q96RF0 AC016405.3-201ENST00000607710 860 ntBASIC17.94■□□□□ 0.46
SNX18Q96RF0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 AC112907.3-201ENST00000577781 2400 ntBASIC17.94■□□□□ 0.46
SNX18Q96RF0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 MCRIP2P1-201ENST00000394346 511 ntBASIC17.93■□□□□ 0.46
SNX18Q96RF0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.93■□□□□ 0.46
SNX18Q96RF0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 RARRES2P4-201ENST00000514074 484 ntBASIC17.93■□□□□ 0.46
SNX18Q96RF0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.93■□□□□ 0.46
SNX18Q96RF0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNX18Q96RF0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX18Q96RF0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
SNX18Q96RF0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX18Q96RF0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX18Q96RF0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX18Q96RF0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX18Q96RF0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 MIR663A-201ENST00000385250 93 ntBASIC17.92■□□□□ 0.46
SNX18Q96RF0 CROCCP5-201ENST00000436658 830 ntBASIC17.92■□□□□ 0.46
SNX18Q96RF0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX18Q96RF0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX18Q96RF0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNX18Q96RF0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.91■□□□□ 0.46
SNX18Q96RF0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms