Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 AC097488.1-201ENST00000507834 756 ntBASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 UNC93B7-201ENST00000509439 705 ntBASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CSMD1Q96PZ7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CSMD1Q96PZ7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.89■□□□□ 0.3
CSMD1Q96PZ7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.89■□□□□ 0.3
CSMD1Q96PZ7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CSMD1Q96PZ7 AL356652.1-201ENST00000615962 565 ntBASIC16.89■□□□□ 0.3
CSMD1Q96PZ7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.89■□□□□ 0.3
CSMD1Q96PZ7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
CSMD1Q96PZ7 AC092338.2-201ENST00000568827 1415 ntBASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 AC104692.2-201ENST00000603054 253 ntBASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSMD1Q96PZ7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSMD1Q96PZ7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 LINC02084-201ENST00000606069 1096 ntBASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSMD1Q96PZ7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 HYMAI.1-201ENST00000620949 238 ntBASIC16.86■□□□□ 0.29
CSMD1Q96PZ7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms