Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.46■□□□□ 0.22
GAFA1Q96PS6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
GAFA1Q96PS6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.46■□□□□ 0.22
GAFA1Q96PS6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 FAM201B-201ENST00000458407 597 ntBASIC16.45■□□□□ 0.22
GAFA1Q96PS6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 AC073648.6-201ENST00000641589 218 ntBASIC16.45■□□□□ 0.22
GAFA1Q96PS6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GAFA1Q96PS6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 AC128676.1-201ENST00000454392 318 ntBASIC16.44■□□□□ 0.22
GAFA1Q96PS6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GAFA1Q96PS6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 MTDHP1-201ENST00000605323 784 ntBASIC16.43■□□□□ 0.22
GAFA1Q96PS6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.43■□□□□ 0.22
GAFA1Q96PS6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms