Protein–RNA interactions for Protein: Q96NR8

RDH12, Retinol dehydrogenase 12, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12Q96NR8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RDH12Q96NR8 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.15■□□□□ 0.5
RDH12Q96NR8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RDH12Q96NR8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.15■□□□□ 0.5
RDH12Q96NR8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
RDH12Q96NR8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RDH12Q96NR8 AL355001.2-201ENST00000620617 1191 ntBASIC18.15■□□□□ 0.5
RDH12Q96NR8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.15■□□□□ 0.5
RDH12Q96NR8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RDH12Q96NR8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RDH12Q96NR8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RDH12Q96NR8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RDH12Q96NR8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RDH12Q96NR8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RDH12Q96NR8 AC006333.2-201ENST00000607957 2099 ntBASIC18.14■□□□□ 0.5
RDH12Q96NR8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.14■□□□□ 0.5
RDH12Q96NR8 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.5
RDH12Q96NR8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RDH12Q96NR8 AL161938.1-201ENST00000569833 2180 ntBASIC18.14■□□□□ 0.49
RDH12Q96NR8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RDH12Q96NR8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RDH12Q96NR8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 AC097381.1-201ENST00000429019 1296 ntBASIC18.14■□□□□ 0.49
RDH12Q96NR8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 AC079140.4-201ENST00000507448 529 ntBASIC18.14■□□□□ 0.49
RDH12Q96NR8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RDH12Q96NR8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.14■□□□□ 0.49
RDH12Q96NR8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RDH12Q96NR8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RDH12Q96NR8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RDH12Q96NR8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH12Q96NR8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH12Q96NR8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH12Q96NR8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH12Q96NR8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 AL356652.1-201ENST00000615962 565 ntBASIC18.13■□□□□ 0.49
RDH12Q96NR8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH12Q96NR8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH12Q96NR8 KRT8P17-201ENST00000453110 1448 ntBASIC18.13■□□□□ 0.49
RDH12Q96NR8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RDH12Q96NR8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH12Q96NR8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH12Q96NR8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 PTBP1P-201ENST00000554374 1601 ntBASIC18.12■□□□□ 0.49
RDH12Q96NR8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 AC105265.2-201ENST00000467189 838 ntBASIC18.12■□□□□ 0.49
RDH12Q96NR8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH12Q96NR8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH12Q96NR8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 AC104581.1-202ENST00000635932 2618 ntBASIC18.11■□□□□ 0.49
RDH12Q96NR8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH12Q96NR8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 AC027682.1-201ENST00000562846 899 ntBASIC18.11■□□□□ 0.49
RDH12Q96NR8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 AC087633.2-202ENST00000565166 1439 ntBASIC18.11■□□□□ 0.49
RDH12Q96NR8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH12Q96NR8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RDH12Q96NR8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RDH12Q96NR8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms