Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AL589743.5-201ENST00000616611 1050 ntBASIC14.79□□□□□ -0.04
LINC00477Q96M19 AC011767.1-201ENST00000617410 1153 ntBASIC14.79□□□□□ -0.04
LINC00477Q96M19 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC00477Q96M19 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC00477Q96M19 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00477Q96M19 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00477Q96M19 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC00477Q96M19 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00477Q96M19 AC093484.2-201ENST00000580996 2166 ntBASIC14.78□□□□□ -0.04
LINC00477Q96M19 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
LINC00477Q96M19 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LINC00477Q96M19 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LINC00477Q96M19 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LINC00477Q96M19 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC00477Q96M19 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC00477Q96M19 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 KRT18P5-201ENST00000436075 1291 ntBASIC14.78□□□□□ -0.04
LINC00477Q96M19 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00477Q96M19 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00477Q96M19 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00477Q96M19 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
LINC00477Q96M19 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00477Q96M19 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00477Q96M19 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LINC00477Q96M19 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00477Q96M19 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.77□□□□□ -0.04
LINC00477Q96M19 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00477Q96M19 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00477Q96M19 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00477Q96M19 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 AC007322.1-201ENST00000426983 750 ntBASIC14.77□□□□□ -0.05
LINC00477Q96M19 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 OR10C1-204ENST00000622521 1039 ntBASIC14.77□□□□□ -0.05
LINC00477Q96M19 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00477Q96M19 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00477Q96M19 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 AC120498.9-201ENST00000339021 3867 ntBASIC14.76□□□□□ -0.05
LINC00477Q96M19 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00477Q96M19 AC006015.1-201ENST00000429970 570 ntBASIC14.76□□□□□ -0.05
LINC00477Q96M19 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 C2orf69P4-201ENST00000565394 541 ntBASIC14.76□□□□□ -0.05
LINC00477Q96M19 BID-214ENST00000617586 542 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC00477Q96M19 PHGDH-210ENST00000641115 1638 ntBASIC14.76□□□□□ -0.05
LINC00477Q96M19 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms