Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CALR3Q96L12 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CALR3Q96L12 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CALR3Q96L12 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALR3Q96L12 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.88■□□□□ 0.93
CALR3Q96L12 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.87■□□□□ 0.93
CALR3Q96L12 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.87■□□□□ 0.93
CALR3Q96L12 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CALR3Q96L12 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CALR3Q96L12 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CALR3Q96L12 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.87■□□□□ 0.93
CALR3Q96L12 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.87■□□□□ 0.93
CALR3Q96L12 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CALR3Q96L12 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.87■□□□□ 0.93
CALR3Q96L12 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CALR3Q96L12 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.87■□□□□ 0.93
CALR3Q96L12 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALR3Q96L12 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CALR3Q96L12 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CALR3Q96L12 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CALR3Q96L12 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CALR3Q96L12 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.86■□□□□ 0.93
CALR3Q96L12 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.86■□□□□ 0.93
CALR3Q96L12 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.86■□□□□ 0.93
CALR3Q96L12 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CALR3Q96L12 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CALR3Q96L12 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CALR3Q96L12 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.86■□□□□ 0.93
CALR3Q96L12 AL512625.2-201ENST00000417533 625 ntBASIC20.86■□□□□ 0.93
CALR3Q96L12 AC006015.1-201ENST00000429970 570 ntBASIC20.86■□□□□ 0.93
CALR3Q96L12 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.86■□□□□ 0.93
CALR3Q96L12 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.86■□□□□ 0.93
CALR3Q96L12 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.86■□□□□ 0.93
CALR3Q96L12 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.86■□□□□ 0.93
CALR3Q96L12 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CALR3Q96L12 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CALR3Q96L12 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CALR3Q96L12 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CALR3Q96L12 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CALR3Q96L12 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.85■□□□□ 0.93
CALR3Q96L12 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CALR3Q96L12 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CALR3Q96L12 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CALR3Q96L12 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.85■□□□□ 0.93
CALR3Q96L12 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.85■□□□□ 0.93
CALR3Q96L12 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CALR3Q96L12 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.85■□□□□ 0.93
CALR3Q96L12 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.85■□□□□ 0.93
CALR3Q96L12 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.85■□□□□ 0.93
CALR3Q96L12 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.85■□□□□ 0.93
CALR3Q96L12 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CALR3Q96L12 AC026471.1-201ENST00000564629 3026 ntBASIC20.85■□□□□ 0.93
CALR3Q96L12 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CALR3Q96L12 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CALR3Q96L12 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CALR3Q96L12 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CALR3Q96L12 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CALR3Q96L12 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CALR3Q96L12 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CALR3Q96L12 CYP2T1P-201ENST00000432607 1285 ntBASIC20.84■□□□□ 0.93
CALR3Q96L12 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.84■□□□□ 0.93
CALR3Q96L12 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.84■□□□□ 0.93
CALR3Q96L12 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.84■□□□□ 0.93
CALR3Q96L12 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.84■□□□□ 0.93
CALR3Q96L12 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.84■□□□□ 0.93
CALR3Q96L12 AC011767.1-201ENST00000617410 1153 ntBASIC20.84■□□□□ 0.93
CALR3Q96L12 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.84■□□□□ 0.93
CALR3Q96L12 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.84■□□□□ 0.93
CALR3Q96L12 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.84■□□□□ 0.93
CALR3Q96L12 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.84■□□□□ 0.93
CALR3Q96L12 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.84■□□□□ 0.93
CALR3Q96L12 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
CALR3Q96L12 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.84■□□□□ 0.93
CALR3Q96L12 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.84■□□□□ 0.93
CALR3Q96L12 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms