Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.82■□□□□ 0.92
VCPIP1Q96JH7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 AC116562.4-201ENST00000641316 2276 ntBASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 AC007952.6-201ENST00000573168 2673 ntBASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 AC003957.1-201ENST00000625108 2673 ntBASIC20.81■□□□□ 0.92
VCPIP1Q96JH7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 CD99P1-205ENST00000527459 561 ntBASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 AC060766.5-201ENST00000590539 871 ntBASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCPIP1Q96JH7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 AC093484.2-201ENST00000580996 2166 ntBASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 AL138781.1-201ENST00000566567 1274 ntBASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 AC142086.2-201ENST00000569753 217 ntBASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 AC133041.1-202ENST00000642053 222 ntBASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.79■□□□□ 0.92
VCPIP1Q96JH7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 AC092368.3-202ENST00000574180 1591 ntBASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 AC005332.7-201ENST00000614046 2005 ntBASIC20.78■□□□□ 0.92
VCPIP1Q96JH7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms