Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 AL135905.2-201ENST00000584934 1404 ntBASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 RPS2P4-201ENST00000476944 856 ntBASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCD1Q96GM5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 AC012618.2-201ENST00000428058 849 ntBASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SMARCD1Q96GM5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 Z99916.2-201ENST00000604037 246 ntBASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCD1Q96GM5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 RPS2P55-201ENST00000397318 883 ntBASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 AC107956.1-201ENST00000494359 873 ntBASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 AC233702.5-201ENST00000584107 538 ntBASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCD1Q96GM5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms