Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 DPP3P2-201ENST00000416030 1696 ntBASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.55■□□□□ 0.72
SH3KBP1Q96B97 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SH3KBP1Q96B97 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 AL391422.3-201ENST00000603791 2761 ntBASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 HLA-G-202ENST00000376815 851 ntBASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 HLA-G-203ENST00000376818 1127 ntBASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 AC233263.1-201ENST00000578059 224 ntBASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 MTDHP1-201ENST00000605323 784 ntBASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH3KBP1Q96B97 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 MIR718-201ENST00000390190 70 ntBASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 RPS2P4-201ENST00000476944 856 ntBASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.52■□□□□ 0.72
SH3KBP1Q96B97 PRKY-204ENST00000533551 1019 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms