Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS33AQ96AX1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
VPS33AQ96AX1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 AL032819.2-201ENST00000624543 2162 ntBASIC18.92■□□□□ 0.62
VPS33AQ96AX1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
VPS33AQ96AX1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms