Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 KRASP1-201ENST00000407852 552 ntBASIC18.64■□□□□ 0.57
TM9SF4Q92544 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TM9SF4Q92544 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 LINC01023-201ENST00000606054 436 ntBASIC18.64■□□□□ 0.57
TM9SF4Q92544 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF4Q92544 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TM9SF4Q92544 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 AL049637.2-201ENST00000641778 930 ntBASIC18.62■□□□□ 0.57
TM9SF4Q92544 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF4Q92544 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF4Q92544 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 RARRES2P10-201ENST00000564312 460 ntBASIC18.61■□□□□ 0.57
TM9SF4Q92544 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 AC112907.3-201ENST00000577781 2400 ntBASIC18.61■□□□□ 0.57
TM9SF4Q92544 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TM9SF4Q92544 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF4Q92544 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF4Q92544 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.6■□□□□ 0.57
TM9SF4Q92544 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF4Q92544 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
TM9SF4Q92544 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF4Q92544 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF4Q92544 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF4Q92544 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF4Q92544 ECEL1P3-201ENST00000427961 737 ntBASIC18.6■□□□□ 0.57
TM9SF4Q92544 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.6■□□□□ 0.57
TM9SF4Q92544 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.6■□□□□ 0.57
TM9SF4Q92544 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF4Q92544 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.6■□□□□ 0.57
TM9SF4Q92544 AC020907.5-201ENST00000624372 1936 ntBASIC18.6■□□□□ 0.57
TM9SF4Q92544 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.6■□□□□ 0.57
TM9SF4Q92544 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TM9SF4Q92544 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TM9SF4Q92544 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms