Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATL1Q8WXF7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATL1Q8WXF7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.27■□□□□ 0.68
ATL1Q8WXF7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.27■□□□□ 0.68
ATL1Q8WXF7 ID1-201ENST00000376105 1233 ntBASIC19.27■□□□□ 0.68
ATL1Q8WXF7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.27■□□□□ 0.68
ATL1Q8WXF7 HLA-L-209ENST00000420110 1011 ntBASIC19.27■□□□□ 0.68
ATL1Q8WXF7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.27■□□□□ 0.68
ATL1Q8WXF7 AC098934.4-201ENST00000564127 592 ntBASIC19.27■□□□□ 0.68
ATL1Q8WXF7 AC083880.1-201ENST00000608266 535 ntBASIC19.27■□□□□ 0.68
ATL1Q8WXF7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.27■□□□□ 0.68
ATL1Q8WXF7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATL1Q8WXF7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATL1Q8WXF7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ATL1Q8WXF7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATL1Q8WXF7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATL1Q8WXF7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATL1Q8WXF7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 AL355802.2-201ENST00000402069 882 ntBASIC19.26■□□□□ 0.67
ATL1Q8WXF7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 PNMA6B-201ENST00000538162 1200 ntBASIC19.26■□□□□ 0.67
ATL1Q8WXF7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.26■□□□□ 0.67
ATL1Q8WXF7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
ATL1Q8WXF7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATL1Q8WXF7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms