Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 AC068338.2-201ENST00000563278 1430 ntBASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 CNN2P6-201ENST00000439038 900 ntBASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC44A1Q8WWI5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC44A1Q8WWI5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 CYP2T3P-201ENST00000601990 817 ntBASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC44A1Q8WWI5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC44A1Q8WWI5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
SLC44A1Q8WWI5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 AC034268.1-201ENST00000441047 882 ntBASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC44A1Q8WWI5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms