Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB1Q8WWH5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 MIR939-201ENST00000401314 82 ntBASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 SLC7A5P2-201ENST00000553010 536 ntBASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 CCDC92B-201ENST00000575506 885 ntBASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB1Q8WWH5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.07■□□□□ 0.48
TRUB1Q8WWH5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 IRS3P-201ENST00000223076 1006 ntBASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 PGM5P4-201ENST00000421970 445 ntBASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 AC105265.2-201ENST00000467189 838 ntBASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRUB1Q8WWH5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 AC018470.1-201ENST00000624790 3129 ntBASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB1Q8WWH5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms