Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 AC011506.1-201ENST00000474329 610 ntBASIC18.45■□□□□ 0.54
CT55Q8WUE5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CT55Q8WUE5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 AL049597.2-201ENST00000565575 961 ntBASIC18.45■□□□□ 0.54
CT55Q8WUE5 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.45■□□□□ 0.54
CT55Q8WUE5 AC131212.4-201ENST00000623606 975 ntBASIC18.45■□□□□ 0.54
CT55Q8WUE5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.45■□□□□ 0.54
CT55Q8WUE5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CT55Q8WUE5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CT55Q8WUE5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CT55Q8WUE5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CT55Q8WUE5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.44■□□□□ 0.54
CT55Q8WUE5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CT55Q8WUE5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CT55Q8WUE5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CT55Q8WUE5 TERF1P1-201ENST00000311003 1181 ntBASIC18.44■□□□□ 0.54
CT55Q8WUE5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.44■□□□□ 0.54
CT55Q8WUE5 AL137013.1-201ENST00000432946 1228 ntBASIC18.44■□□□□ 0.54
CT55Q8WUE5 SLC25A3P1-201ENST00000443844 931 ntBASIC18.44■□□□□ 0.54
CT55Q8WUE5 KRT18P35-201ENST00000510488 1269 ntBASIC18.44■□□□□ 0.54
CT55Q8WUE5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.44■□□□□ 0.54
CT55Q8WUE5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CT55Q8WUE5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CT55Q8WUE5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 DGCR10-201ENST00000609839 495 ntBASIC18.43■□□□□ 0.54
CT55Q8WUE5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CT55Q8WUE5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CT55Q8WUE5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CT55Q8WUE5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.42■□□□□ 0.54
CT55Q8WUE5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.42■□□□□ 0.54
CT55Q8WUE5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.42■□□□□ 0.54
CT55Q8WUE5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.42■□□□□ 0.54
CT55Q8WUE5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CT55Q8WUE5 AP005242.2-201ENST00000580065 1175 ntBASIC18.42■□□□□ 0.54
CT55Q8WUE5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CT55Q8WUE5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CT55Q8WUE5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 ARMC10P1-201ENST00000313754 855 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms