Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 GCSHP5-201ENST00000443090 522 ntBASIC20.75■□□□□ 0.91
RNF139Q8WU17 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 RPPH1-201ENST00000516869 333 ntBASIC20.75■□□□□ 0.91
RNF139Q8WU17 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 FAM197Y4-202ENST00000622692 608 ntBASIC20.75■□□□□ 0.91
RNF139Q8WU17 AL023875.1-201ENST00000640777 796 ntBASIC20.75■□□□□ 0.91
RNF139Q8WU17 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF139Q8WU17 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 AC239809.2-201ENST00000415381 517 ntBASIC20.74■□□□□ 0.91
RNF139Q8WU17 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF139Q8WU17 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RNF139Q8WU17 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 TCF3P1-201ENST00000423021 1937 ntBASIC20.73■□□□□ 0.91
RNF139Q8WU17 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 AL359736.2-201ENST00000621992 437 ntBASIC20.73■□□□□ 0.91
RNF139Q8WU17 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 PCDHAC2-203ENST00000615316 3011 ntBASIC20.73■□□□□ 0.91
RNF139Q8WU17 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
RNF139Q8WU17 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF139Q8WU17 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF139Q8WU17 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF139Q8WU17 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms