Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SSH3Q8TE77 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SSH3Q8TE77 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 RPPH1-201ENST00000516869 333 ntBASIC24.47■■□□□ 1.51
SSH3Q8TE77 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SSH3Q8TE77 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 TMEM191A-211ENST00000637163 1067 ntBASIC24.47■■□□□ 1.51
SSH3Q8TE77 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.47■■□□□ 1.51
SSH3Q8TE77 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SSH3Q8TE77 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SSH3Q8TE77 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SSH3Q8TE77 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SSH3Q8TE77 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SSH3Q8TE77 AP006587.1-201ENST00000534129 1502 ntBASIC24.46■■□□□ 1.51
SSH3Q8TE77 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SSH3Q8TE77 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 PRKY-204ENST00000533551 1019 ntBASIC24.46■■□□□ 1.51
SSH3Q8TE77 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 AL359736.2-201ENST00000621992 437 ntBASIC24.46■■□□□ 1.51
SSH3Q8TE77 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SSH3Q8TE77 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SSH3Q8TE77 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SSH3Q8TE77 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SSH3Q8TE77 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
SSH3Q8TE77 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.46■■□□□ 1.51
SSH3Q8TE77 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.45■■□□□ 1.51
SSH3Q8TE77 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SSH3Q8TE77 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SSH3Q8TE77 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
SSH3Q8TE77 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SSH3Q8TE77 GCSHP5-201ENST00000443090 522 ntBASIC24.45■■□□□ 1.5
SSH3Q8TE77 YBX1P10-201ENST00000444752 975 ntBASIC24.45■■□□□ 1.5
SSH3Q8TE77 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
SSH3Q8TE77 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SSH3Q8TE77 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.45■■□□□ 1.5
SSH3Q8TE77 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.45■■□□□ 1.5
SSH3Q8TE77 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.45■■□□□ 1.5
SSH3Q8TE77 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SSH3Q8TE77 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
SSH3Q8TE77 NBPF21P-201ENST00000425093 1451 ntBASIC24.45■■□□□ 1.5
SSH3Q8TE77 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.45■■□□□ 1.5
SSH3Q8TE77 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
SSH3Q8TE77 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SSH3Q8TE77 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SSH3Q8TE77 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SSH3Q8TE77 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SSH3Q8TE77 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SSH3Q8TE77 KRASP1-201ENST00000407852 552 ntBASIC24.44■■□□□ 1.5
SSH3Q8TE77 AC239809.2-201ENST00000415381 517 ntBASIC24.44■■□□□ 1.5
SSH3Q8TE77 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 C1QBPP2-201ENST00000528754 825 ntBASIC24.44■■□□□ 1.5
SSH3Q8TE77 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SSH3Q8TE77 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SSH3Q8TE77 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SSH3Q8TE77 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SSH3Q8TE77 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.44■■□□□ 1.5
SSH3Q8TE77 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.43■■□□□ 1.5
SSH3Q8TE77 AFG3L1P-217ENST00000557444 2447 ntBASIC24.43■■□□□ 1.5
SSH3Q8TE77 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.43■■□□□ 1.5
SSH3Q8TE77 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SSH3Q8TE77 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.43■■□□□ 1.5
SSH3Q8TE77 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SSH3Q8TE77 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC24.43■■□□□ 1.5
SSH3Q8TE77 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.43■■□□□ 1.5
SSH3Q8TE77 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SSH3Q8TE77 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
SSH3Q8TE77 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.43■■□□□ 1.5
SSH3Q8TE77 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SSH3Q8TE77 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SSH3Q8TE77 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SSH3Q8TE77 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
SSH3Q8TE77 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SSH3Q8TE77 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SSH3Q8TE77 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SSH3Q8TE77 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
SSH3Q8TE77 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms