Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 AC006970.2-201ENST00000450065 779 ntBASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 AC083906.2-201ENST00000511578 360 ntBASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF439Q8NDP4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF439Q8NDP4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF439Q8NDP4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF439Q8NDP4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF439Q8NDP4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF439Q8NDP4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF439Q8NDP4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 GPX1P1-201ENST00000388829 606 ntBASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 GUSBP6-202ENST00000438529 1198 ntBASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 KRT16P6-202ENST00000425692 1426 ntBASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ZNF439Q8NDP4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 MIPEPP3-201ENST00000412105 444 ntBASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 NCF1B-203ENST00000435988 1254 ntBASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 AC125437.2-201ENST00000625180 2167 ntBASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF439Q8NDP4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms