Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC29.48■■■□□ 2.31
ABCA6Q8N139 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ABCA6Q8N139 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
ABCA6Q8N139 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC29.48■■■□□ 2.31
ABCA6Q8N139 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC29.48■■■□□ 2.31
ABCA6Q8N139 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC29.48■■■□□ 2.31
ABCA6Q8N139 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
ABCA6Q8N139 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC29.48■■■□□ 2.31
ABCA6Q8N139 Z98882.1-201ENST00000622160 2253 ntBASIC29.48■■■□□ 2.31
ABCA6Q8N139 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC29.47■■■□□ 2.31
ABCA6Q8N139 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC29.47■■■□□ 2.31
ABCA6Q8N139 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC29.47■■■□□ 2.31
ABCA6Q8N139 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC29.47■■■□□ 2.31
ABCA6Q8N139 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ABCA6Q8N139 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ABCA6Q8N139 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
ABCA6Q8N139 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ABCA6Q8N139 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC29.46■■■□□ 2.31
ABCA6Q8N139 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC29.46■■■□□ 2.31
ABCA6Q8N139 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ABCA6Q8N139 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC29.46■■■□□ 2.31
ABCA6Q8N139 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
ABCA6Q8N139 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ABCA6Q8N139 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ABCA6Q8N139 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
ABCA6Q8N139 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ABCA6Q8N139 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ABCA6Q8N139 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
ABCA6Q8N139 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC29.45■■■□□ 2.31
ABCA6Q8N139 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC29.45■■■□□ 2.31
ABCA6Q8N139 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
ABCA6Q8N139 AL024507.2-201ENST00000606070 2574 ntBASIC29.45■■■□□ 2.31
ABCA6Q8N139 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ABCA6Q8N139 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC29.45■■■□□ 2.31
ABCA6Q8N139 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC29.45■■■□□ 2.31
ABCA6Q8N139 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA6Q8N139 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA6Q8N139 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA6Q8N139 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC29.45■■■□□ 2.3
ABCA6Q8N139 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC29.45■■■□□ 2.3
ABCA6Q8N139 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA6Q8N139 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 AC005229.4-201ENST00000610085 2198 ntBASIC29.44■■■□□ 2.3
ABCA6Q8N139 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA6Q8N139 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA6Q8N139 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA6Q8N139 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA6Q8N139 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA6Q8N139 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 VPS72-207ENST00000640458 689 ntTSL 5 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA6Q8N139 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC29.44■■■□□ 2.3
ABCA6Q8N139 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA6Q8N139 AL049796.1-201ENST00000565336 1766 ntBASIC29.44■■■□□ 2.3
ABCA6Q8N139 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA6Q8N139 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA6Q8N139 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA6Q8N139 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC29.43■■■□□ 2.3
ABCA6Q8N139 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC29.43■■■□□ 2.3
ABCA6Q8N139 HOMER2P1-201ENST00000455653 964 ntBASIC29.43■■■□□ 2.3
ABCA6Q8N139 PP7080-204ENST00000510714 601 ntTSL 3 BASIC29.43■■■□□ 2.3
ABCA6Q8N139 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC29.43■■■□□ 2.3
ABCA6Q8N139 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
ABCA6Q8N139 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA6Q8N139 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA6Q8N139 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC29.43■■■□□ 2.3
ABCA6Q8N139 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA6Q8N139 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA6Q8N139 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA6Q8N139 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA6Q8N139 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA6Q8N139 DAP-202ENST00000432074 1048 ntTSL 2 BASIC29.42■■■□□ 2.3
ABCA6Q8N139 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA6Q8N139 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC29.42■■■□□ 2.3
ABCA6Q8N139 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC29.41■■■□□ 2.3
ABCA6Q8N139 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC29.41■■■□□ 2.3
ABCA6Q8N139 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ABCA6Q8N139 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC29.41■■■□□ 2.3
ABCA6Q8N139 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC29.41■■■□□ 2.3
ABCA6Q8N139 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC29.41■■■□□ 2.3
ABCA6Q8N139 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ABCA6Q8N139 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA6Q8N139 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA6Q8N139 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
ABCA6Q8N139 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA6Q8N139 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC29.4■■■□□ 2.3
ABCA6Q8N139 TSPY21P-201ENST00000433481 731 ntBASIC29.4■■■□□ 2.3
ABCA6Q8N139 TSPY23P-201ENST00000440136 739 ntBASIC29.4■■■□□ 2.3
ABCA6Q8N139 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC29.4■■■□□ 2.3
ABCA6Q8N139 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC29.4■■■□□ 2.3
ABCA6Q8N139 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA6Q8N139 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA6Q8N139 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA6Q8N139 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms