Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 CD99P1-205ENST00000527459 561 ntBASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 AC008687.6-201ENST00000596318 630 ntBASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 AC120498.8-201ENST00000614275 531 ntBASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 AC124283.5-201ENST00000624661 1809 ntBASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCP3Q8IZU3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCP3Q8IZU3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.78■■□□□ 1.08
SYCP3Q8IZU3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 AP003097.1-201ENST00000530657 1135 ntBASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.77■■□□□ 1.08
SYCP3Q8IZU3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.77■■□□□ 1.07
SYCP3Q8IZU3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SYCP3Q8IZU3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SYCP3Q8IZU3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYCP3Q8IZU3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 AP001271.2-201ENST00000624018 1556 ntBASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.75■■□□□ 1.07
SYCP3Q8IZU3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms