Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 AC110285.5-201ENST00000611501 352 ntBASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 AP006587.1-201ENST00000534129 1502 ntBASIC18.27■□□□□ 0.51
C9orf40Q8IXQ3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
C9orf40Q8IXQ3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C9orf40Q8IXQ3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 AC009237.14-201ENST00000609975 1594 ntBASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 PCDHAC2-203ENST00000615316 3011 ntBASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf40Q8IXQ3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C9orf40Q8IXQ3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf40Q8IXQ3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms