Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 AC113410.3-201ENST00000623366 203 ntBASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 AL391422.3-201ENST00000603791 2761 ntBASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.84■□□□□ 0.93
SCN4BQ8IWT1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 AF186192.3-201ENST00000583427 947 ntBASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN4BQ8IWT1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN4BQ8IWT1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN4BQ8IWT1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN4BQ8IWT1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 AP002982.1-201ENST00000492365 877 ntBASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 GABARAPL3-202ENST00000624044 1851 ntBASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN4BQ8IWT1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms