Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 AC091076.1-201ENST00000610741 619 ntBASIC20.95■□□□□ 0.94
RNF135Q8IUD6 AC006011.2-201ENST00000621313 1158 ntBASIC20.95■□□□□ 0.94
RNF135Q8IUD6 AL358472.4-201ENST00000633140 710 ntBASIC20.95■□□□□ 0.94
RNF135Q8IUD6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF135Q8IUD6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF135Q8IUD6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 LIN28AP1-201ENST00000429574 405 ntBASIC20.93■□□□□ 0.94
RNF135Q8IUD6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF135Q8IUD6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 AC116562.2-201ENST00000507042 360 ntBASIC20.92■□□□□ 0.94
RNF135Q8IUD6 KRT18P56-201ENST00000507275 550 ntBASIC20.92■□□□□ 0.94
RNF135Q8IUD6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 AL356652.1-201ENST00000615962 565 ntBASIC20.92■□□□□ 0.94
RNF135Q8IUD6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF135Q8IUD6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 ATP5G1P1-201ENST00000448724 379 ntBASIC20.91■□□□□ 0.94
RNF135Q8IUD6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF135Q8IUD6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms