Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.93■□□□□ 0.46
ATG4DQ86TL0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4DQ86TL0 AC006557.6-201ENST00000623071 864 ntBASIC17.93■□□□□ 0.46
ATG4DQ86TL0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.93■□□□□ 0.46
ATG4DQ86TL0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATG4DQ86TL0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4DQ86TL0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4DQ86TL0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATG4DQ86TL0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.93■□□□□ 0.46
ATG4DQ86TL0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 TMEM191A-211ENST00000637163 1067 ntBASIC17.92■□□□□ 0.46
ATG4DQ86TL0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.92■□□□□ 0.46
ATG4DQ86TL0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATG4DQ86TL0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 AC092368.3-202ENST00000574180 1591 ntBASIC17.91■□□□□ 0.46
ATG4DQ86TL0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 AC060766.5-201ENST00000590539 871 ntBASIC17.91■□□□□ 0.46
ATG4DQ86TL0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
ATG4DQ86TL0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.9■□□□□ 0.46
ATG4DQ86TL0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 PNMA6B-201ENST00000538162 1200 ntBASIC17.9■□□□□ 0.46
ATG4DQ86TL0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATG4DQ86TL0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.89■□□□□ 0.46
ATG4DQ86TL0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.89■□□□□ 0.46
ATG4DQ86TL0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
ATG4DQ86TL0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATG4DQ86TL0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATG4DQ86TL0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATG4DQ86TL0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.89■□□□□ 0.45
ATG4DQ86TL0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms