Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 KRT18P6-201ENST00000555540 1265 ntBASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC015910.1-202ENST00000580264 633 ntTSL 5 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 RPL21P136-201ENST00000605378 396 ntBASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.2
PPP4R3CPQ6ZMV5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R3CPQ6ZMV5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R3CPQ6ZMV5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R3CPQ6ZMV5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R3CPQ6ZMV5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R3CPQ6ZMV5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R3CPQ6ZMV5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 LINC01006-201ENST00000333319 2292 ntBASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC073314.1-201ENST00000568729 2216 ntBASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 RNU4-40P-201ENST00000364351 143 ntBASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 MTND4P11-201ENST00000417020 1058 ntBASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC079416.3-201ENST00000624479 549 ntBASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 CYP21A1P-202ENST00000354927 1481 ntBASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC134043.2-201ENST00000624206 2238 ntBASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 KRT17P1-201ENST00000399211 1546 ntBASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.57■■□□□ 1.2
PPP4R3CPQ6ZMV5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC091874.3-201ENST00000512672 1195 ntBASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R3CPQ6ZMV5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC020978.7-201ENST00000575953 1187 ntBASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 AF230666.2-201ENST00000602328 725 ntBASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R3CPQ6ZMV5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 MED20-203ENST00000409060 815 ntTSL 2 BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 LSM12P1-201ENST00000411836 588 ntBASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 DUSP5P2-201ENST00000426873 1033 ntBASIC22.54■■□□□ 1.2
PPP4R3CPQ6ZMV5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms