Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 YBX1P2-201ENST00000489612 999 ntBASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 AC010653.2-201ENST00000623505 997 ntBASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 PHGDH-210ENST00000641115 1638 ntBASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CNKSR3Q6P9H4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 FEM1AP4-201ENST00000443167 1987 ntBASIC21.34■■□□□ 1.01
CNKSR3Q6P9H4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 TSPY5P-201ENST00000426936 936 ntBASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 COX11P1-201ENST00000489116 835 ntBASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.33■■□□□ 1.01
CNKSR3Q6P9H4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CNKSR3Q6P9H4 AL117328.2-201ENST00000624617 1940 ntBASIC21.33■■□□□ 1
CNKSR3Q6P9H4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CNKSR3Q6P9H4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 AC007663.1-201ENST00000438948 1240 ntBASIC21.32■■□□□ 1
CNKSR3Q6P9H4 AC092647.4-201ENST00000457211 535 ntBASIC21.32■■□□□ 1
CNKSR3Q6P9H4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR3Q6P9H4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNKSR3Q6P9H4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms