Protein–RNA interactions for Protein: Q5VVW2

GARNL3, GTPase-activating Rap/Ran-GAP domain-like protein 3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3Q5VVW2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GARNL3Q5VVW2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GARNL3Q5VVW2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GARNL3Q5VVW2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.83■□□□□ 0.6
GARNL3Q5VVW2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GARNL3Q5VVW2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GARNL3Q5VVW2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GARNL3Q5VVW2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GARNL3Q5VVW2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 PHGDH-210ENST00000641115 1638 ntBASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 AC110285.5-201ENST00000611501 352 ntBASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 AL512408.1-201ENST00000569378 2000 ntBASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
GARNL3Q5VVW2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 AP006294.2-201ENST00000641667 209 ntBASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GARNL3Q5VVW2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 KRASP1-201ENST00000407852 552 ntBASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GARNL3Q5VVW2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 AC018553.1-201ENST00000616682 1458 ntBASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.79■□□□□ 0.6
GARNL3Q5VVW2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms