Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 DUSP5P2-201ENST00000426873 1033 ntBASIC20.53■□□□□ 0.88
LRRC38Q5VT99 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC38Q5VT99 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 TFP1-202ENST00000475455 1573 ntBASIC20.52■□□□□ 0.88
LRRC38Q5VT99 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 NCF1B-203ENST00000435988 1254 ntBASIC20.52■□□□□ 0.88
LRRC38Q5VT99 GUSBP6-202ENST00000438529 1198 ntBASIC20.52■□□□□ 0.88
LRRC38Q5VT99 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC38Q5VT99 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC38Q5VT99 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC38Q5VT99 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRC38Q5VT99 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
LRRC38Q5VT99 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 AC018445.3-201ENST00000624177 1945 ntBASIC20.51■□□□□ 0.87
LRRC38Q5VT99 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.51■□□□□ 0.87
LRRC38Q5VT99 AC091874.3-201ENST00000512672 1195 ntBASIC20.51■□□□□ 0.87
LRRC38Q5VT99 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC38Q5VT99 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 TSPY6P-201ENST00000448518 926 ntBASIC20.5■□□□□ 0.87
LRRC38Q5VT99 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC38Q5VT99 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRRC38Q5VT99 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC38Q5VT99 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms