Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RAB6CQ53S08 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB6CQ53S08 CD99P1-205ENST00000527459 561 ntBASIC20.58■□□□□ 0.89
RAB6CQ53S08 AP003097.1-201ENST00000530657 1135 ntBASIC20.58■□□□□ 0.89
RAB6CQ53S08 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB6CQ53S08 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB6CQ53S08 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB6CQ53S08 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RAB6CQ53S08 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
RAB6CQ53S08 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB6CQ53S08 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB6CQ53S08 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.58■□□□□ 0.88
RAB6CQ53S08 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB6CQ53S08 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RAB6CQ53S08 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB6CQ53S08 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 AP001271.2-201ENST00000624018 1556 ntBASIC20.56■□□□□ 0.88
RAB6CQ53S08 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB6CQ53S08 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB6CQ53S08 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RAB6CQ53S08 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB6CQ53S08 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB6CQ53S08 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 ESRRAP1-201ENST00000400596 1257 ntBASIC20.55■□□□□ 0.88
RAB6CQ53S08 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.55■□□□□ 0.88
RAB6CQ53S08 AC026366.1-201ENST00000488803 879 ntBASIC20.55■□□□□ 0.88
RAB6CQ53S08 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB6CQ53S08 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB6CQ53S08 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RAB6CQ53S08 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB6CQ53S08 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB6CQ53S08 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
RAB6CQ53S08 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB6CQ53S08 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB6CQ53S08 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.54■□□□□ 0.88
RAB6CQ53S08 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RAB6CQ53S08 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB6CQ53S08 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB6CQ53S08 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB6CQ53S08 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RAB6CQ53S08 POM121L13P-201ENST00000422362 380 ntBASIC20.54■□□□□ 0.88
RAB6CQ53S08 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB6CQ53S08 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB6CQ53S08 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.54■□□□□ 0.88
RAB6CQ53S08 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms