Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 FITM1-202ENST00000559294 800 ntBASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SHROOM1Q2M3G4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 AC005521.1-201ENST00000393351 872 ntBASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 AL391422.3-201ENST00000603791 2761 ntBASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHROOM1Q2M3G4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 AC004980.1-204ENST00000429707 299 ntBASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 KRT18P57-201ENST00000443599 1254 ntBASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 YBX1P10-201ENST00000444752 975 ntBASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHROOM1Q2M3G4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 BX119927.1-201ENST00000636596 1552 ntBASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 AL445228.2-201ENST00000605589 952 ntBASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 AL445675.2-201ENST00000620291 557 ntBASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 LINC01568-207ENST00000641790 1380 ntBASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SHROOM1Q2M3G4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 AC008040.2-201ENST00000461049 708 ntBASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 B3GAT3P1-201ENST00000471720 806 ntBASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHROOM1Q2M3G4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHROOM1Q2M3G4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms