Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.98■■□□□ 1.43
RFX7Q2KHR2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 BX088651.1-201ENST00000540551 451 ntBASIC23.97■■□□□ 1.43
RFX7Q2KHR2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX7Q2KHR2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFX7Q2KHR2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RFX7Q2KHR2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
RFX7Q2KHR2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
RFX7Q2KHR2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RFX7Q2KHR2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 AL121906.2-201ENST00000621597 723 ntBASIC23.95■■□□□ 1.42
RFX7Q2KHR2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.95■■□□□ 1.42
RFX7Q2KHR2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.94■■□□□ 1.42
RFX7Q2KHR2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 PRKY-204ENST00000533551 1019 ntBASIC23.93■■□□□ 1.42
RFX7Q2KHR2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 AC112907.3-201ENST00000577781 2400 ntBASIC23.93■■□□□ 1.42
RFX7Q2KHR2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFX7Q2KHR2 AC018553.1-201ENST00000616682 1458 ntBASIC23.93■■□□□ 1.42
RFX7Q2KHR2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 TSPY15P-201ENST00000457163 923 ntBASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms