Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH17Q12864 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH17Q12864 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.97■□□□□ 0.79
CDH17Q12864 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH17Q12864 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH17Q12864 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH17Q12864 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH17Q12864 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CDH17Q12864 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH17Q12864 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH17Q12864 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDH17Q12864 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH17Q12864 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH17Q12864 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH17Q12864 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH17Q12864 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH17Q12864 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.96■□□□□ 0.79
CDH17Q12864 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH17Q12864 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDH17Q12864 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.96■□□□□ 0.79
CDH17Q12864 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH17Q12864 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH17Q12864 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CDH17Q12864 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDH17Q12864 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CDH17Q12864 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH17Q12864 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CDH17Q12864 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH17Q12864 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH17Q12864 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH17Q12864 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH17Q12864 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH17Q12864 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH17Q12864 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH17Q12864 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH17Q12864 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH17Q12864 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH17Q12864 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH17Q12864 AC097658.1-201ENST00000475555 843 ntBASIC19.95■□□□□ 0.78
CDH17Q12864 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH17Q12864 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.95■□□□□ 0.78
CDH17Q12864 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CDH17Q12864 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH17Q12864 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDH17Q12864 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH17Q12864 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH17Q12864 AC007952.6-201ENST00000573168 2673 ntBASIC19.95■□□□□ 0.78
CDH17Q12864 AC003957.1-201ENST00000625108 2673 ntBASIC19.95■□□□□ 0.78
CDH17Q12864 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH17Q12864 AC116351.2-201ENST00000606540 1585 ntBASIC19.95■□□□□ 0.78
CDH17Q12864 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH17Q12864 AC116562.4-201ENST00000641316 2276 ntBASIC19.95■□□□□ 0.78
CDH17Q12864 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH17Q12864 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH17Q12864 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH17Q12864 AC018553.1-201ENST00000616682 1458 ntBASIC19.94■□□□□ 0.78
CDH17Q12864 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH17Q12864 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH17Q12864 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH17Q12864 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH17Q12864 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH17Q12864 MYC-209ENST00000641252 345 ntBASIC19.94■□□□□ 0.78
CDH17Q12864 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH17Q12864 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH17Q12864 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH17Q12864 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH17Q12864 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH17Q12864 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH17Q12864 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH17Q12864 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH17Q12864 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH17Q12864 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH17Q12864 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH17Q12864 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CDH17Q12864 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH17Q12864 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH17Q12864 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH17Q12864 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH17Q12864 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.93■□□□□ 0.78
CDH17Q12864 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CDH17Q12864 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH17Q12864 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH17Q12864 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH17Q12864 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms