Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDR2Q01850 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDR2Q01850 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDR2Q01850 AL390719.1-204ENST00000412397 1219 ntBASIC21.06■□□□□ 0.96
CDR2Q01850 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.06■□□□□ 0.96
CDR2Q01850 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDR2Q01850 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.06■□□□□ 0.96
CDR2Q01850 MYC-209ENST00000641252 345 ntBASIC21.06■□□□□ 0.96
CDR2Q01850 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CDR2Q01850 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDR2Q01850 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.06■□□□□ 0.96
CDR2Q01850 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDR2Q01850 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CDR2Q01850 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDR2Q01850 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.05■□□□□ 0.96
CDR2Q01850 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.05■□□□□ 0.96
CDR2Q01850 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.05■□□□□ 0.96
CDR2Q01850 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.05■□□□□ 0.96
CDR2Q01850 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.05■□□□□ 0.96
CDR2Q01850 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.05■□□□□ 0.96
CDR2Q01850 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.05■□□□□ 0.96
CDR2Q01850 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.05■□□□□ 0.96
CDR2Q01850 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CDR2Q01850 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR2Q01850 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR2Q01850 AC116562.4-201ENST00000641316 2276 ntBASIC21.04■□□□□ 0.96
CDR2Q01850 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDR2Q01850 AC097658.1-201ENST00000475555 843 ntBASIC21.04■□□□□ 0.96
CDR2Q01850 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDR2Q01850 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 AL138781.1-201ENST00000566567 1274 ntBASIC21.04■□□□□ 0.96
CDR2Q01850 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.04■□□□□ 0.96
CDR2Q01850 AC018553.1-201ENST00000616682 1458 ntBASIC21.04■□□□□ 0.96
CDR2Q01850 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDR2Q01850 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR2Q01850 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDR2Q01850 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.04■□□□□ 0.96
CDR2Q01850 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDR2Q01850 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDR2Q01850 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR2Q01850 AC116351.2-201ENST00000606540 1585 ntBASIC21.03■□□□□ 0.96
CDR2Q01850 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CDR2Q01850 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR2Q01850 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR2Q01850 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.03■□□□□ 0.96
CDR2Q01850 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.03■□□□□ 0.96
CDR2Q01850 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDR2Q01850 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.03■□□□□ 0.96
CDR2Q01850 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDR2Q01850 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR2Q01850 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR2Q01850 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CDR2Q01850 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDR2Q01850 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.03■□□□□ 0.96
CDR2Q01850 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR2Q01850 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.02■□□□□ 0.96
CDR2Q01850 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR2Q01850 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.02■□□□□ 0.96
CDR2Q01850 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR2Q01850 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CDR2Q01850 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.02■□□□□ 0.96
CDR2Q01850 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.02■□□□□ 0.96
CDR2Q01850 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR2Q01850 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR2Q01850 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR2Q01850 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.02■□□□□ 0.96
CDR2Q01850 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.02■□□□□ 0.96
CDR2Q01850 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.02■□□□□ 0.96
CDR2Q01850 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CDR2Q01850 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.02■□□□□ 0.96
CDR2Q01850 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.02■□□□□ 0.96
CDR2Q01850 AC098934.4-201ENST00000564127 592 ntBASIC21.02■□□□□ 0.96
CDR2Q01850 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.02■□□□□ 0.96
CDR2Q01850 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CDR2Q01850 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.02■□□□□ 0.96
CDR2Q01850 AL109923.1-201ENST00000618799 583 ntBASIC21.02■□□□□ 0.96
CDR2Q01850 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CDR2Q01850 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.02■□□□□ 0.96
CDR2Q01850 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms