Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA52P62987 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UBA52P62987 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBA52P62987 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBA52P62987 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBA52P62987 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.97■□□□□ 0.31
UBA52P62987 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBA52P62987 HCG11-201ENST00000411553 5696 ntBASIC16.97■□□□□ 0.31
UBA52P62987 AC090340.1-201ENST00000620778 4980 ntBASIC16.97■□□□□ 0.31
UBA52P62987 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBA52P62987 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBA52P62987 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBA52P62987 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UBA52P62987 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UBA52P62987 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UBA52P62987 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
UBA52P62987 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.97■□□□□ 0.31
UBA52P62987 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBA52P62987 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.97■□□□□ 0.31
UBA52P62987 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
UBA52P62987 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.97■□□□□ 0.31
UBA52P62987 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
UBA52P62987 AC092118.2-201ENST00000613495 667 ntBASIC16.97■□□□□ 0.31
UBA52P62987 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
UBA52P62987 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
UBA52P62987 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBA52P62987 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.97■□□□□ 0.31
UBA52P62987 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBA52P62987 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.97■□□□□ 0.31
UBA52P62987 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UBA52P62987 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UBA52P62987 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
UBA52P62987 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBA52P62987 TCF3P1-201ENST00000423021 1937 ntBASIC16.96■□□□□ 0.31
UBA52P62987 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.96■□□□□ 0.31
UBA52P62987 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 AC093787.1-201ENST00000450396 207 ntBASIC16.96■□□□□ 0.31
UBA52P62987 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.96■□□□□ 0.31
UBA52P62987 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 AC016405.3-201ENST00000607710 860 ntBASIC16.96■□□□□ 0.31
UBA52P62987 AC120498.10-201ENST00000621827 505 ntBASIC16.96■□□□□ 0.31
UBA52P62987 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBA52P62987 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
UBA52P62987 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.96■□□□□ 0.3
UBA52P62987 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBA52P62987 AP006587.3-201ENST00000525742 1516 ntBASIC16.96■□□□□ 0.3
UBA52P62987 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
UBA52P62987 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
UBA52P62987 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.95■□□□□ 0.3
UBA52P62987 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.95■□□□□ 0.3
UBA52P62987 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.95■□□□□ 0.3
UBA52P62987 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 PRORSD1P-201ENST00000295112 541 ntBASIC16.95■□□□□ 0.3
UBA52P62987 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 AL512625.2-201ENST00000417533 625 ntBASIC16.95■□□□□ 0.3
UBA52P62987 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.95■□□□□ 0.3
UBA52P62987 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.95■□□□□ 0.3
UBA52P62987 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.95■□□□□ 0.3
UBA52P62987 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.95■□□□□ 0.3
UBA52P62987 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBA52P62987 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.95■□□□□ 0.3
UBA52P62987 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
UBA52P62987 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA52P62987 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.95■□□□□ 0.3
UBA52P62987 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.95■□□□□ 0.3
UBA52P62987 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBA52P62987 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBA52P62987 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.95■□□□□ 0.3
UBA52P62987 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.94■□□□□ 0.3
UBA52P62987 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA52P62987 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBA52P62987 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.94■□□□□ 0.3
UBA52P62987 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA52P62987 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.94■□□□□ 0.3
UBA52P62987 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
UBA52P62987 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBA52P62987 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA52P62987 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
UBA52P62987 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms